Rewrite this function to use numba and nopython mode. You can assume that the input is a 2d matrix correctly formatted. Call it rref still. def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 pivots = [] used_for_row = [set([i]) for i in range(matrix.shape[0])] matrix = matrix%PH while col+extra < matrix.shape[1]-1 and col < matrix.shape[0]: if matrix[col,col+extra] == 0: if np.all(matrix[:,col] == 0): extra += 1 continue other = np.argwhere(matrix[:,col+extra] != 0).flatten()[-1] if other < col: extra += 1 continue matrix[col], matrix[other] = list(matrix[other]), list(matrix[col]) used_for_row[col], used_for_row[other] = used_for_row[other], used_for_row[col] pivots.append(col+extra) pivot = matrix[col,col+extra] if col+extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH-1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH-2 pivot //= 2 matrix[col] *= pivot matrix[col] %= PH others = np.argwhere(matrix[:,col+extra]).flatten() for i in others: if i == col: continue used_for_row[i] |= used_for_row[col] if col < graphlen: matrix[i] -= matrix[col]*matrix[i,col+extra] else: while matrix[i,col+extra] != 0: matrix[i] = (matrix[i]-matrix[col])%PH matrix[i] %= PH col += 1 matrix = np.array(matrix)%PH return [sorted(x) for x in used_for_row]
Rewrite this function to use numba and nopython mode. You can assume that the input is a 2d matrix correctly formatted. Call it rref still. def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 pivots = [] used_for_row = [set([i]) for i in range(matrix.shape[0])] matrix = matrix%PH while col+extra < matrix.shape[1]-1 and col < matrix.shape[0]: if matrix[col,col+extra] == 0: if np.all(matrix[:,col] == 0): extra += 1 continue other = np.argwhere(matrix[:,col+extra] != 0).flatten()[-1] if other < col: extra += 1 continue matrix[col], matrix[other] = list(matrix[other]), list(matrix[col]) used_for_row[col], used_for_row[other] = used_for_row[other], used_for_row[col] pivots.append(col+extra) pivot = matrix[col,col+extra] if col+extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH-1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH-2 pivot //= 2 matrix[col] *= pivot matrix[col] %= PH others = np.argwhere(matrix[:,col+extra]).flatten() for i in others: if i == col: continue used_for_row[i] |= used_for_row[col] if col < graphlen: matrix[i] -= matrix[col]*matrix[i,col+extra] else: while matrix[i,col+extra] != 0: matrix[i] = (matrix[i]-matrix[col])%PH matrix[i] %= PH col += 1 matrix = np.array(matrix)%PH return [sorted(x) for x in used_for_row]
To rewrite the function using Numba and nopython mode, we'll need to make a few adjustments. Numba's nopython mode requires that all operations be compatible with Numba's type system, and it doesn't support certain Python features and NumPy operations. Specifically, we need to avoid using lists of sets and certain high-level NumPy operations inside the nopython mode. Here's the updated version of the function:
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 | import numpy as np from numba import njit @njit def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 pivots = [] used_for_row = np.zeros((matrix.shape[0], matrix.shape[0]), dtype=np.int32) for i in range(matrix.shape[0]): used_for_row[i, i] = 1 matrix = matrix % PH while col + extra < matrix.shape[1] - 1 and col < matrix.shape[0]: if matrix[col, col + extra] == 0: if np.all(matrix[:, col + extra] == 0): extra += 1 continue other = np.argwhere(matrix[:, col + extra] != 0).flatten()[-1] if other < col: extra += 1 continue matrix[[col, other]] = matrix[[other, col]] used_for_row[[col, other]] = used_for_row[[other, col]] pivots.append(col + extra) pivot = matrix[col, col + extra] if col + extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH - 1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH - 2 pivot //= 2 matrix[col] *= pivot matrix[col] %= PH others = np.argwhere(matrix[:, col + extra]).flatten() for i in others: if i == col: continue used_for_row[i] |= used_for_row[col] if col < graphlen: matrix[i] -= matrix[col] * matrix[i, col + extra] else: while matrix[i, col + extra] != 0: matrix[i] = (matrix[i] - matrix[col]) % PH matrix[i] %= PH col += 1 matrix = matrix % PH used_for_row_list = [] for i in range(used_for_row.shape[0]): used_for_row_list.append(sorted(np.argwhere(used_for_row[i]).flatten())) return used_for_row_list |
I extracted the following code from that output:
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 | import numpy as np from numba import njit @njit def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 pivots = [] used_for_row = np.zeros((matrix.shape[0], matrix.shape[0]), dtype=np.int32) for i in range(matrix.shape[0]): used_for_row[i, i] = 1 matrix = matrix % PH while col + extra < matrix.shape[1] - 1 and col < matrix.shape[0]: if matrix[col, col + extra] == 0: if np.all(matrix[:, col + extra] == 0): extra += 1 continue other = np.argwhere(matrix[:, col + extra] != 0).flatten()[-1] if other < col: extra += 1 continue matrix[[col, other]] = matrix[[other, col]] used_for_row[[col, other]] = used_for_row[[other, col]] pivots.append(col + extra) pivot = matrix[col, col + extra] if col + extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH - 1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH - 2 pivot //= 2 matrix[col] *= pivot matrix[col] %= PH others = np.argwhere(matrix[:, col + extra]).flatten() for i in others: if i == col: continue used_for_row[i] |= used_for_row[col] if col < graphlen: matrix[i] -= matrix[col] * matrix[i, col + extra] else: while matrix[i, col + extra] != 0: matrix[i] = (matrix[i] - matrix[col]) % PH matrix[i] %= PH col += 1 matrix = matrix % PH used_for_row_list = [] for i in range(used_for_row.shape[0]): used_for_row_list.append(sorted(np.argwhere(used_for_row[i]).flatten())) return used_for_row_list |
Running the following program:
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 | import numpy as np from numba import njit @njit def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 pivots = [] used_for_row = np.zeros((matrix.shape[0], matrix.shape[0]), dtype=np.int32) for i in range(matrix.shape[0]): used_for_row[i, i] = 1 matrix = matrix % PH while col + extra < matrix.shape[1] - 1 and col < matrix.shape[0]: if matrix[col, col + extra] == 0: if np.all(matrix[:, col + extra] == 0): extra += 1 continue other = np.argwhere(matrix[:, col + extra] != 0).flatten()[-1] if other < col: extra += 1 continue matrix[[col, other]] = matrix[[other, col]] used_for_row[[col, other]] = used_for_row[[other, col]] pivots.append(col + extra) pivot = matrix[col, col + extra] if col + extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH - 1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH - 2 pivot //= 2 matrix[col] *= pivot matrix[col] %= PH others = np.argwhere(matrix[:, col + extra]).flatten() for i in others: if i == col: continue used_for_row[i] |= used_for_row[col] if col < graphlen: matrix[i] -= matrix[col] * matrix[i, col + extra] else: while matrix[i, col + extra] != 0: matrix[i] = (matrix[i] - matrix[col]) % PH matrix[i] %= PH col += 1 matrix = matrix % PH used_for_row_list = [] for i in range(used_for_row.shape[0]): used_for_row_list.append(sorted(np.argwhere(used_for_row[i]).flatten())) return used_for_row_list arr = np.array([[1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -20], [0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, 0, 0, 0, -20], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, -30], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, -20], [1, 0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -1, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -14], [0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, -30], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, -1, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -13], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, -1, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, -20], [0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -13], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -13], [0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -13], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 1, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -9], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, -20], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, -40], [1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]]) answer = rref(arr, 37) expected = [[0, 38], [0, 38], [0, 6, 28, 35, 38], [0, 6, 18, 21, 28, 35, 38], [0, 6, 28, 35, 38], [0, 6, 21, 28, 35, 38], [0, 5, 10, 23, 38], [0, 5, 10, 23, 38], [0, 5, 10, 23, 38], [0, 5, 9, 10, 23, 38], [0, 5, 9, 10, 13, 17, 23, 30, 38], [0, 5, 9, 10, 11, 23, 27, 38], [0, 5, 9, 10, 11, 23, 27, 38], [0, 5, 9, 10, 11, 23, 25, 27, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 24, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 5, 9, 10, 13, 17, 23, 30, 38], [0, 5, 9, 10, 13, 17, 23, 30, 38], [0, 5, 9, 10, 13, 17, 23, 30, 32, 38], [0, 5, 9, 10, 13, 17, 23, 30, 32, 33, 38], [0, 22, 29, 38], [0, 22, 29, 38], [0, 6, 28, 35, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [14, 18, 21, 28, 35]] assert answer == expected, f'Wrong answer; got {answer} instead of {expected}' print('All tests passed') |
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 | Traceback (most recent call last): File "/usr/src/app/main.py", line 66, in <module> answer = rref(arr, 37) File "/usr/local/lib/python3.10/dist-packages/numba/core/dispatcher.py", line 468, in _compile_for_args error_rewrite(e, 'typing') File "/usr/local/lib/python3.10/dist-packages/numba/core/dispatcher.py", line 409, in error_rewrite raise e.with_traceback(None) numba.core.errors.TypingError: Failed in nopython mode pipeline (step: nopython frontend) No implementation of function Function(<built-in function getitem>) found for signature:</p> <blockquote> <blockquote> <blockquote> <p>getitem(array(int64, 2d, C), list(int64)<iv=None>)</p> </blockquote> </blockquote> </blockquote> <p>There are 22 candidate implementations: - Of which 20 did not match due to: Overload of function 'getitem': File: <numerous>: Line N/A. With argument(s): '(array(int64, 2d, C), list(int64)<iv=None>)': No match. - Of which 2 did not match due to: Overload in function 'GetItemBuffer.generic': File: numba/core/typing/arraydecl.py: Line 209. With argument(s): '(array(int64, 2d, C), list(int64)<iv=None>)': Rejected as the implementation raised a specific error: NumbaTypeError: Unsupported array index type list(int64)<iv=None> in [List(int64, False)] raised from /usr/local/lib/python3.10/dist-packages/numba/core/typing/arraydecl.py:102 During: typing of intrinsic-call at /usr/src/app/main.py (29) File "main.py", line 29: def rref(matrix, graphlen): <source elided> matrix[[col, other]] = matrix[[other, col]] ^ |
Testing if the previous output contains the string All tests passed
: False
Testing if the previous output contains the string njit
: True
Testing if the previous output contains the string nopython
: False
Testing if the previous output contains the string import numba
: False
Testing if the previous output contains the string from numba
: True
Rewrite this function to use numba and nopython mode. You can assume that the input is a 2d matrix correctly formatted. Call it rref still. def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 pivots = [] used_for_row = [set([i]) for i in range(matrix.shape[0])] matrix = matrix%PH while col+extra < matrix.shape[1]-1 and col < matrix.shape[0]: if matrix[col,col+extra] == 0: if np.all(matrix[:,col] == 0): extra += 1 continue other = np.argwhere(matrix[:,col+extra] != 0).flatten()[-1] if other < col: extra += 1 continue matrix[col], matrix[other] = list(matrix[other]), list(matrix[col]) used_for_row[col], used_for_row[other] = used_for_row[other], used_for_row[col] pivots.append(col+extra) pivot = matrix[col,col+extra] if col+extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH-1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH-2 pivot //= 2 matrix[col] *= pivot matrix[col] %= PH others = np.argwhere(matrix[:,col+extra]).flatten() for i in others: if i == col: continue used_for_row[i] |= used_for_row[col] if col < graphlen: matrix[i] -= matrix[col]*matrix[i,col+extra] else: while matrix[i,col+extra] != 0: matrix[i] = (matrix[i]-matrix[col])%PH matrix[i] %= PH col += 1 matrix = np.array(matrix)%PH return [sorted(x) for x in used_for_row]
Rewrite this function to use numba and nopython mode. You can assume that the input is a 2d matrix correctly formatted. Call it rref still. def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 pivots = [] used_for_row = [set([i]) for i in range(matrix.shape[0])] matrix = matrix%PH while col+extra < matrix.shape[1]-1 and col < matrix.shape[0]: if matrix[col,col+extra] == 0: if np.all(matrix[:,col] == 0): extra += 1 continue other = np.argwhere(matrix[:,col+extra] != 0).flatten()[-1] if other < col: extra += 1 continue matrix[col], matrix[other] = list(matrix[other]), list(matrix[col]) used_for_row[col], used_for_row[other] = used_for_row[other], used_for_row[col] pivots.append(col+extra) pivot = matrix[col,col+extra] if col+extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH-1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH-2 pivot //= 2 matrix[col] *= pivot matrix[col] %= PH others = np.argwhere(matrix[:,col+extra]).flatten() for i in others: if i == col: continue used_for_row[i] |= used_for_row[col] if col < graphlen: matrix[i] -= matrix[col]*matrix[i,col+extra] else: while matrix[i,col+extra] != 0: matrix[i] = (matrix[i]-matrix[col])%PH matrix[i] %= PH col += 1 matrix = np.array(matrix)%PH return [sorted(x) for x in used_for_row]
To rewrite the function using Numba with `nopython` mode, we'll need to adjust the function to be compatible with Numba's restrictions. Numba's `nopython` mode does not support Python sets, so we'll have to replace them with lists or another compatible structure. Additionally, Numba requires explicit type declarations for some operations. Here is a rewritten version using Numba:
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 | import numpy as np from numba import njit, int32, int64 @njit def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 pivots = [] # Using lists of lists instead of sets for Numba compatibility used_for_row = [[i] for i in range(matrix.shape[0])] matrix = matrix % PH while col + extra < matrix.shape[1] - 1 and col < matrix.shape[0]: if matrix[col, col + extra] == 0: if np.all(matrix[:, col + extra] == 0): extra += 1 continue other = np.argwhere(matrix[:, col + extra] != 0).flatten()[-1] if other < col: extra += 1 continue matrix[col], matrix[other] = list(matrix[other]), list(matrix[col]) used_for_row[col], used_for_row[other] = used_for_row[other], used_for_row[col] pivots.append(col + extra) pivot = matrix[col, col + extra] if col + extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH - 1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH - 2 pivot //= 2 matrix[col] *= pivot matrix[col] %= PH others = np.argwhere(matrix[:, col + extra]).flatten() for i in others: if i == col: continue used_for_row[i].extend(used_for_row[col]) used_for_row[i] = list(set(used_for_row[i])) # Ensure uniqueness if col < graphlen: matrix[i] -= matrix[col] * matrix[i, col + extra] else: while matrix[i, col + extra] != 0: matrix[i] = (matrix[i] - matrix[col]) % PH matrix[i] %= PH col += 1 matrix = np.array(matrix) % PH return [sorted(x) for x in used_for_row] # Example usage: matrix = np.array([[2, 4, 6], [1, 3, 5], [3, 6, 9]], dtype=int32) graphlen = 3 result = rref(matrix, graphlen) print(result) |
I extracted the following code from that output:
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 | import numpy as np from numba import njit, int32, int64 @njit def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 pivots = [] # Using lists of lists instead of sets for Numba compatibility used_for_row = [[i] for i in range(matrix.shape[0])] matrix = matrix % PH while col + extra < matrix.shape[1] - 1 and col < matrix.shape[0]: if matrix[col, col + extra] == 0: if np.all(matrix[:, col + extra] == 0): extra += 1 continue other = np.argwhere(matrix[:, col + extra] != 0).flatten()[-1] if other < col: extra += 1 continue matrix[col], matrix[other] = list(matrix[other]), list(matrix[col]) used_for_row[col], used_for_row[other] = used_for_row[other], used_for_row[col] pivots.append(col + extra) pivot = matrix[col, col + extra] if col + extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH - 1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH - 2 pivot //= 2 matrix[col] *= pivot matrix[col] %= PH others = np.argwhere(matrix[:, col + extra]).flatten() for i in others: if i == col: continue used_for_row[i].extend(used_for_row[col]) used_for_row[i] = list(set(used_for_row[i])) # Ensure uniqueness if col < graphlen: matrix[i] -= matrix[col] * matrix[i, col + extra] else: while matrix[i, col + extra] != 0: matrix[i] = (matrix[i] - matrix[col]) % PH matrix[i] %= PH col += 1 matrix = np.array(matrix) % PH return [sorted(x) for x in used_for_row] # Example usage: matrix = np.array([[2, 4, 6], [1, 3, 5], [3, 6, 9]], dtype=int32) graphlen = 3 result = rref(matrix, graphlen) print(result) |
Running the following program:
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 | import numpy as np from numba import njit, int32, int64 @njit def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 pivots = [] # Using lists of lists instead of sets for Numba compatibility used_for_row = [[i] for i in range(matrix.shape[0])] matrix = matrix % PH while col + extra < matrix.shape[1] - 1 and col < matrix.shape[0]: if matrix[col, col + extra] == 0: if np.all(matrix[:, col + extra] == 0): extra += 1 continue other = np.argwhere(matrix[:, col + extra] != 0).flatten()[-1] if other < col: extra += 1 continue matrix[col], matrix[other] = list(matrix[other]), list(matrix[col]) used_for_row[col], used_for_row[other] = used_for_row[other], used_for_row[col] pivots.append(col + extra) pivot = matrix[col, col + extra] if col + extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH - 1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH - 2 pivot //= 2 matrix[col] *= pivot matrix[col] %= PH others = np.argwhere(matrix[:, col + extra]).flatten() for i in others: if i == col: continue used_for_row[i].extend(used_for_row[col]) used_for_row[i] = list(set(used_for_row[i])) # Ensure uniqueness if col < graphlen: matrix[i] -= matrix[col] * matrix[i, col + extra] else: while matrix[i, col + extra] != 0: matrix[i] = (matrix[i] - matrix[col]) % PH matrix[i] %= PH col += 1 matrix = np.array(matrix) % PH return [sorted(x) for x in used_for_row] # Example usage: matrix = np.array([[2, 4, 6], [1, 3, 5], [3, 6, 9]], dtype=int32) graphlen = 3 result = rref(matrix, graphlen) print(result) arr = np.array([[1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -20], [0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, 0, 0, 0, -20], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, -30], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, -20], [1, 0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -1, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -14], [0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 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0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, -20], [0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -13], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -13], [0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -13], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 1, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -9], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, -20], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, -40], [1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]]) answer = rref(arr, 37) expected = [[0, 38], [0, 38], [0, 6, 28, 35, 38], [0, 6, 18, 21, 28, 35, 38], [0, 6, 28, 35, 38], [0, 6, 21, 28, 35, 38], [0, 5, 10, 23, 38], [0, 5, 10, 23, 38], [0, 5, 10, 23, 38], [0, 5, 9, 10, 23, 38], [0, 5, 9, 10, 13, 17, 23, 30, 38], [0, 5, 9, 10, 11, 23, 27, 38], [0, 5, 9, 10, 11, 23, 27, 38], [0, 5, 9, 10, 11, 23, 25, 27, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 24, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 5, 9, 10, 13, 17, 23, 30, 38], [0, 5, 9, 10, 13, 17, 23, 30, 38], [0, 5, 9, 10, 13, 17, 23, 30, 32, 38], [0, 5, 9, 10, 13, 17, 23, 30, 32, 33, 38], [0, 22, 29, 38], [0, 22, 29, 38], [0, 6, 28, 35, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [14, 18, 21, 28, 35]] assert answer == expected, f'Wrong answer; got {answer} instead of {expected}' print('All tests passed') |
Traceback (most recent call last):
File "/usr/src/app/main.py", line 60, in <module>
matrix = np.array([[2, 4, 6], [1, 3, 5], [3, 6, 9]], dtype=int32)
TypeError: Cannot interpret 'int32' as a data type
Testing if the previous output contains the string All tests passed
: False
Testing if the previous output contains the string njit
: True
Testing if the previous output contains the string nopython
: False
Testing if the previous output contains the string import numba
: False
Testing if the previous output contains the string from numba
: True
Rewrite this function to use numba and nopython mode. You can assume that the input is a 2d matrix correctly formatted. Call it rref still. def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 pivots = [] used_for_row = [set([i]) for i in range(matrix.shape[0])] matrix = matrix%PH while col+extra < matrix.shape[1]-1 and col < matrix.shape[0]: if matrix[col,col+extra] == 0: if np.all(matrix[:,col] == 0): extra += 1 continue other = np.argwhere(matrix[:,col+extra] != 0).flatten()[-1] if other < col: extra += 1 continue matrix[col], matrix[other] = list(matrix[other]), list(matrix[col]) used_for_row[col], used_for_row[other] = used_for_row[other], used_for_row[col] pivots.append(col+extra) pivot = matrix[col,col+extra] if col+extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH-1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH-2 pivot //= 2 matrix[col] *= pivot matrix[col] %= PH others = np.argwhere(matrix[:,col+extra]).flatten() for i in others: if i == col: continue used_for_row[i] |= used_for_row[col] if col < graphlen: matrix[i] -= matrix[col]*matrix[i,col+extra] else: while matrix[i,col+extra] != 0: matrix[i] = (matrix[i]-matrix[col])%PH matrix[i] %= PH col += 1 matrix = np.array(matrix)%PH return [sorted(x) for x in used_for_row]
Rewrite this function to use numba and nopython mode. You can assume that the input is a 2d matrix correctly formatted. Call it rref still. def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 pivots = [] used_for_row = [set([i]) for i in range(matrix.shape[0])] matrix = matrix%PH while col+extra < matrix.shape[1]-1 and col < matrix.shape[0]: if matrix[col,col+extra] == 0: if np.all(matrix[:,col] == 0): extra += 1 continue other = np.argwhere(matrix[:,col+extra] != 0).flatten()[-1] if other < col: extra += 1 continue matrix[col], matrix[other] = list(matrix[other]), list(matrix[col]) used_for_row[col], used_for_row[other] = used_for_row[other], used_for_row[col] pivots.append(col+extra) pivot = matrix[col,col+extra] if col+extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH-1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH-2 pivot //= 2 matrix[col] *= pivot matrix[col] %= PH others = np.argwhere(matrix[:,col+extra]).flatten() for i in others: if i == col: continue used_for_row[i] |= used_for_row[col] if col < graphlen: matrix[i] -= matrix[col]*matrix[i,col+extra] else: while matrix[i,col+extra] != 0: matrix[i] = (matrix[i]-matrix[col])%PH matrix[i] %= PH col += 1 matrix = np.array(matrix)%PH return [sorted(x) for x in used_for_row]
To use Numba and nopython mode, we'll need to make sure that the function uses only Numba-supported operations and types. Notably, we will replace lists and sets with Numba-compatible data structures such as arrays. Here is the rewritten function using Numba:
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 | import numpy as np from numba import njit @njit def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 pivots = [] used_for_row = np.zeros((matrix.shape[0], matrix.shape[0]), dtype=np.int32) for i in range(matrix.shape[0]): used_for_row[i, i] = 1 matrix = matrix % PH while col + extra < matrix.shape[1] - 1 and col < matrix.shape[0]: if matrix[col, col + extra] == 0: if np.all(matrix[:, col] == 0): extra += 1 continue other = np.argwhere(matrix[:, col + extra] != 0).flatten()[-1] if other < col: extra += 1 continue matrix[[col, other]] = matrix[[other, col]] used_for_row[[col, other]] = used_for_row[[other, col]] pivots.append(col + extra) pivot = matrix[col, col + extra] if col + extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH - 1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH - 2 pivot //= 2 matrix[col] *= pivot matrix[col] %= PH others = np.argwhere(matrix[:, col + extra]).flatten() for i in others: if i == col: continue used_for_row[i] = used_for_row[i] | used_for_row[col] if col < graphlen: matrix[i] -= matrix[col] * matrix[i, col + extra] else: while matrix[i, col + extra] != 0: matrix[i] = (matrix[i] - matrix[col]) % PH matrix[i] %= PH col += 1 matrix = np.array(matrix) % PH result = [] for i in range(used_for_row.shape[0]): row_set = [] for j in range(used_for_row.shape[1]): if used_for_row[i, j] == 1: row_set.append(j) result.append(sorted(row_set)) return result |
I extracted the following code from that output:
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 | import numpy as np from numba import njit @njit def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 pivots = [] used_for_row = np.zeros((matrix.shape[0], matrix.shape[0]), dtype=np.int32) for i in range(matrix.shape[0]): used_for_row[i, i] = 1 matrix = matrix % PH while col + extra < matrix.shape[1] - 1 and col < matrix.shape[0]: if matrix[col, col + extra] == 0: if np.all(matrix[:, col] == 0): extra += 1 continue other = np.argwhere(matrix[:, col + extra] != 0).flatten()[-1] if other < col: extra += 1 continue matrix[[col, other]] = matrix[[other, col]] used_for_row[[col, other]] = used_for_row[[other, col]] pivots.append(col + extra) pivot = matrix[col, col + extra] if col + extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH - 1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH - 2 pivot //= 2 matrix[col] *= pivot matrix[col] %= PH others = np.argwhere(matrix[:, col + extra]).flatten() for i in others: if i == col: continue used_for_row[i] = used_for_row[i] | used_for_row[col] if col < graphlen: matrix[i] -= matrix[col] * matrix[i, col + extra] else: while matrix[i, col + extra] != 0: matrix[i] = (matrix[i] - matrix[col]) % PH matrix[i] %= PH col += 1 matrix = np.array(matrix) % PH result = [] for i in range(used_for_row.shape[0]): row_set = [] for j in range(used_for_row.shape[1]): if used_for_row[i, j] == 1: row_set.append(j) result.append(sorted(row_set)) return result |
Running the following program:
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 | import numpy as np from numba import njit @njit def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 pivots = [] used_for_row = np.zeros((matrix.shape[0], matrix.shape[0]), dtype=np.int32) for i in range(matrix.shape[0]): used_for_row[i, i] = 1 matrix = matrix % PH while col + extra < matrix.shape[1] - 1 and col < matrix.shape[0]: if matrix[col, col + extra] == 0: if np.all(matrix[:, col] == 0): extra += 1 continue other = np.argwhere(matrix[:, col + extra] != 0).flatten()[-1] if other < col: extra += 1 continue matrix[[col, other]] = matrix[[other, col]] used_for_row[[col, other]] = used_for_row[[other, col]] pivots.append(col + extra) pivot = matrix[col, col + extra] if col + extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH - 1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH - 2 pivot //= 2 matrix[col] *= pivot matrix[col] %= PH others = np.argwhere(matrix[:, col + extra]).flatten() for i in others: if i == col: continue used_for_row[i] = used_for_row[i] | used_for_row[col] if col < graphlen: matrix[i] -= matrix[col] * matrix[i, col + extra] else: while matrix[i, col + extra] != 0: matrix[i] = (matrix[i] - matrix[col]) % PH matrix[i] %= PH col += 1 matrix = np.array(matrix) % PH result = [] for i in range(used_for_row.shape[0]): row_set = [] for j in range(used_for_row.shape[1]): if used_for_row[i, j] == 1: row_set.append(j) result.append(sorted(row_set)) return result arr = np.array([[1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -20], [0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, 0, 0, 0, -20], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, -30], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, -20], [1, 0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -1, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -14], [0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, -30], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, -1, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -13], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, -1, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, 0, 0, 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0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -13], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 1, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -9], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, -20], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, -40], [1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]]) answer = rref(arr, 37) expected = [[0, 38], [0, 38], [0, 6, 28, 35, 38], [0, 6, 18, 21, 28, 35, 38], [0, 6, 28, 35, 38], [0, 6, 21, 28, 35, 38], [0, 5, 10, 23, 38], [0, 5, 10, 23, 38], [0, 5, 10, 23, 38], [0, 5, 9, 10, 23, 38], [0, 5, 9, 10, 13, 17, 23, 30, 38], [0, 5, 9, 10, 11, 23, 27, 38], [0, 5, 9, 10, 11, 23, 27, 38], [0, 5, 9, 10, 11, 23, 25, 27, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 24, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 5, 9, 10, 13, 17, 23, 30, 38], [0, 5, 9, 10, 13, 17, 23, 30, 38], [0, 5, 9, 10, 13, 17, 23, 30, 32, 38], [0, 5, 9, 10, 13, 17, 23, 30, 32, 33, 38], [0, 22, 29, 38], [0, 22, 29, 38], [0, 6, 28, 35, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [14, 18, 21, 28, 35]] assert answer == expected, f'Wrong answer; got {answer} instead of {expected}' print('All tests passed') |
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 | Traceback (most recent call last): File "/usr/src/app/main.py", line 71, in <module> answer = rref(arr, 37) File "/usr/local/lib/python3.10/dist-packages/numba/core/dispatcher.py", line 468, in _compile_for_args error_rewrite(e, 'typing') File "/usr/local/lib/python3.10/dist-packages/numba/core/dispatcher.py", line 409, in error_rewrite raise e.with_traceback(None) numba.core.errors.TypingError: Failed in nopython mode pipeline (step: nopython frontend) No implementation of function Function(<built-in function getitem>) found for signature:</p> <blockquote> <blockquote> <blockquote> <p>getitem(array(int64, 2d, C), list(int64)<iv=None>)</p> </blockquote> </blockquote> </blockquote> <p>There are 22 candidate implementations: - Of which 20 did not match due to: Overload of function 'getitem': File: <numerous>: Line N/A. With argument(s): '(array(int64, 2d, C), list(int64)<iv=None>)': No match. - Of which 2 did not match due to: Overload in function 'GetItemBuffer.generic': File: numba/core/typing/arraydecl.py: Line 209. With argument(s): '(array(int64, 2d, C), list(int64)<iv=None>)': Rejected as the implementation raised a specific error: NumbaTypeError: Unsupported array index type list(int64)<iv=None> in [List(int64, False)] raised from /usr/local/lib/python3.10/dist-packages/numba/core/typing/arraydecl.py:102 During: typing of intrinsic-call at /usr/src/app/main.py (28) File "main.py", line 28: def rref(matrix, graphlen): <source elided> matrix[[col, other]] = matrix[[other, col]] ^ |
Testing if the previous output contains the string All tests passed
: False
Testing if the previous output contains the string njit
: True
Testing if the previous output contains the string nopython
: False
Testing if the previous output contains the string import numba
: False
Testing if the previous output contains the string from numba
: True
Rewrite this function to use numba and nopython mode. You can assume that the input is a 2d matrix correctly formatted. Call it rref still. def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 pivots = [] used_for_row = [set([i]) for i in range(matrix.shape[0])] matrix = matrix%PH while col+extra < matrix.shape[1]-1 and col < matrix.shape[0]: if matrix[col,col+extra] == 0: if np.all(matrix[:,col] == 0): extra += 1 continue other = np.argwhere(matrix[:,col+extra] != 0).flatten()[-1] if other < col: extra += 1 continue matrix[col], matrix[other] = list(matrix[other]), list(matrix[col]) used_for_row[col], used_for_row[other] = used_for_row[other], used_for_row[col] pivots.append(col+extra) pivot = matrix[col,col+extra] if col+extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH-1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH-2 pivot //= 2 matrix[col] *= pivot matrix[col] %= PH others = np.argwhere(matrix[:,col+extra]).flatten() for i in others: if i == col: continue used_for_row[i] |= used_for_row[col] if col < graphlen: matrix[i] -= matrix[col]*matrix[i,col+extra] else: while matrix[i,col+extra] != 0: matrix[i] = (matrix[i]-matrix[col])%PH matrix[i] %= PH col += 1 matrix = np.array(matrix)%PH return [sorted(x) for x in used_for_row]
Rewrite this function to use numba and nopython mode. You can assume that the input is a 2d matrix correctly formatted. Call it rref still. def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 pivots = [] used_for_row = [set([i]) for i in range(matrix.shape[0])] matrix = matrix%PH while col+extra < matrix.shape[1]-1 and col < matrix.shape[0]: if matrix[col,col+extra] == 0: if np.all(matrix[:,col] == 0): extra += 1 continue other = np.argwhere(matrix[:,col+extra] != 0).flatten()[-1] if other < col: extra += 1 continue matrix[col], matrix[other] = list(matrix[other]), list(matrix[col]) used_for_row[col], used_for_row[other] = used_for_row[other], used_for_row[col] pivots.append(col+extra) pivot = matrix[col,col+extra] if col+extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH-1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH-2 pivot //= 2 matrix[col] *= pivot matrix[col] %= PH others = np.argwhere(matrix[:,col+extra]).flatten() for i in others: if i == col: continue used_for_row[i] |= used_for_row[col] if col < graphlen: matrix[i] -= matrix[col]*matrix[i,col+extra] else: while matrix[i,col+extra] != 0: matrix[i] = (matrix[i]-matrix[col])%PH matrix[i] %= PH col += 1 matrix = np.array(matrix)%PH return [sorted(x) for x in used_for_row]
Sure! Here is the rewritten function using `numba` with `nopython` mode:
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 | import numpy as np from numba import njit @njit def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 pivots = [] used_for_row = [set([i]) for i in range(matrix.shape[0])] matrix = matrix % PH while col + extra < matrix.shape[1] - 1 and col < matrix.shape[0]: if matrix[col, col + extra] == 0: if np.all(matrix[:, col] == 0): extra += 1 continue other = np.argwhere(matrix[:, col + extra] != 0).flatten()[-1] if other < col: extra += 1 continue matrix[col], matrix[other] = list(matrix[other]), list(matrix[col]) used_for_row[col], used_for_row[other] = used_for_row[other], used_for_row[col] pivots.append(col + extra) pivot = matrix[col, col + extra] if col + extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH - 1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH - 2 pivot //= 2 matrix[col] *= pivot matrix[col] %= PH others = np.argwhere(matrix[:, col + extra]).flatten() for i in others: if i == col: continue used_for_row[i] |= used_for_row[col] if col < graphlen: matrix[i] -= matrix[col] * matrix[i, col + extra] else: while matrix[i, col + extra] != 0: matrix[i] = (matrix[i] - matrix[col]) % PH matrix[i] %= PH col += 1 matrix = np.array(matrix) % PH return [sorted(list(x)) for x in used_for_row] # Example usage matrix = np.array([[2, 4, 1], [1, 2, 3], [3, 1, 2]]) graphlen = 2 print(rref(matrix, graphlen)) |
I extracted the following code from that output:
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 | import numpy as np from numba import njit @njit def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 pivots = [] used_for_row = [set([i]) for i in range(matrix.shape[0])] matrix = matrix % PH while col + extra < matrix.shape[1] - 1 and col < matrix.shape[0]: if matrix[col, col + extra] == 0: if np.all(matrix[:, col] == 0): extra += 1 continue other = np.argwhere(matrix[:, col + extra] != 0).flatten()[-1] if other < col: extra += 1 continue matrix[col], matrix[other] = list(matrix[other]), list(matrix[col]) used_for_row[col], used_for_row[other] = used_for_row[other], used_for_row[col] pivots.append(col + extra) pivot = matrix[col, col + extra] if col + extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH - 1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH - 2 pivot //= 2 matrix[col] *= pivot matrix[col] %= PH others = np.argwhere(matrix[:, col + extra]).flatten() for i in others: if i == col: continue used_for_row[i] |= used_for_row[col] if col < graphlen: matrix[i] -= matrix[col] * matrix[i, col + extra] else: while matrix[i, col + extra] != 0: matrix[i] = (matrix[i] - matrix[col]) % PH matrix[i] %= PH col += 1 matrix = np.array(matrix) % PH return [sorted(list(x)) for x in used_for_row] # Example usage matrix = np.array([[2, 4, 1], [1, 2, 3], [3, 1, 2]]) graphlen = 2 print(rref(matrix, graphlen)) |
Running the following program:
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 | import numpy as np from numba import njit @njit def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 pivots = [] used_for_row = [set([i]) for i in range(matrix.shape[0])] matrix = matrix % PH while col + extra < matrix.shape[1] - 1 and col < matrix.shape[0]: if matrix[col, col + extra] == 0: if np.all(matrix[:, col] == 0): extra += 1 continue other = np.argwhere(matrix[:, col + extra] != 0).flatten()[-1] if other < col: extra += 1 continue matrix[col], matrix[other] = list(matrix[other]), list(matrix[col]) used_for_row[col], used_for_row[other] = used_for_row[other], used_for_row[col] pivots.append(col + extra) pivot = matrix[col, col + extra] if col + extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH - 1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH - 2 pivot //= 2 matrix[col] *= pivot matrix[col] %= PH others = np.argwhere(matrix[:, col + extra]).flatten() for i in others: if i == col: continue used_for_row[i] |= used_for_row[col] if col < graphlen: matrix[i] -= matrix[col] * matrix[i, col + extra] else: while matrix[i, col + extra] != 0: matrix[i] = (matrix[i] - matrix[col]) % PH matrix[i] %= PH col += 1 matrix = np.array(matrix) % PH return [sorted(list(x)) for x in used_for_row] # Example usage matrix = np.array([[2, 4, 1], [1, 2, 3], [3, 1, 2]]) graphlen = 2 print(rref(matrix, graphlen)) arr = np.array([[1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -20], [0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, 0, 0, 0, -20], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, -30], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, -20], [1, 0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -1, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -14], [0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, -30], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, -1, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -13], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, -1, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, -20], [0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -13], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -13], [0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -13], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 1, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -9], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, -20], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, -40], [1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]]) answer = rref(arr, 37) expected = [[0, 38], [0, 38], [0, 6, 28, 35, 38], [0, 6, 18, 21, 28, 35, 38], [0, 6, 28, 35, 38], [0, 6, 21, 28, 35, 38], [0, 5, 10, 23, 38], [0, 5, 10, 23, 38], [0, 5, 10, 23, 38], [0, 5, 9, 10, 23, 38], [0, 5, 9, 10, 13, 17, 23, 30, 38], [0, 5, 9, 10, 11, 23, 27, 38], [0, 5, 9, 10, 11, 23, 27, 38], [0, 5, 9, 10, 11, 23, 25, 27, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 24, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 5, 9, 10, 13, 17, 23, 30, 38], [0, 5, 9, 10, 13, 17, 23, 30, 38], [0, 5, 9, 10, 13, 17, 23, 30, 32, 38], [0, 5, 9, 10, 13, 17, 23, 30, 32, 33, 38], [0, 22, 29, 38], [0, 22, 29, 38], [0, 6, 28, 35, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [14, 18, 21, 28, 35]] assert answer == expected, f'Wrong answer; got {answer} instead of {expected}' print('All tests passed') |
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 | Traceback (most recent call last): File "/usr/src/app/main.py", line 59, in <module> print(rref(matrix, graphlen)) File "/usr/local/lib/python3.10/dist-packages/numba/core/dispatcher.py", line 468, in _compile_for_args error_rewrite(e, 'typing') File "/usr/local/lib/python3.10/dist-packages/numba/core/dispatcher.py", line 409, in error_rewrite raise e.with_traceback(None) numba.core.errors.TypingError: Failed in nopython mode pipeline (step: nopython frontend) No implementation of function Function(<built-in function array>) found for signature:</p> <blockquote> <blockquote> <blockquote> <p>array(array(int64, 2d, C))</p> </blockquote> </blockquote> </blockquote> <p>There are 2 candidate implementations: - Of which 2 did not match due to: Overload in function 'impl_np_array': File: numba/np/arrayobj.py: Line 5421. With argument(s): '(array(int64, 2d, C))': Rejected as the implementation raised a specific error: TypingError: Failed in nopython mode pipeline (step: nopython frontend) No implementation of function Function(<intrinsic np_array>) found for signature:</p> <pre><code> >>> np_array(array(int64, 2d, C), none) There are 2 candidate implementations: - Of which 2 did not match due to: Intrinsic in function 'np_array': File: numba/np/arrayobj.py: Line 5395. With argument(s): '(array(int64, 2d, C), none)': Rejected as the implementation raised a specific error: TypingError: array(int64, 2d, C) not allowed in a homogeneous sequence raised from /usr/local/lib/python3.10/dist-packages/numba/core/typing/npydecl.py:482 During: resolving callee type: Function(<intrinsic np_array>) During: typing of call at /usr/local/lib/python3.10/dist-packages/numba/np/arrayobj.py (5432) File "../../local/lib/python3.10/dist-packages/numba/np/arrayobj.py", line 5432: def impl(object, dtype=None): return np_array(object, dtype) ^ </code></pre> <p>raised from /usr/local/lib/python3.10/dist-packages/numba/core/typeinfer.py:1091 During: resolving callee type: Function(<built-in function array>) During: typing of call at /usr/src/app/main.py (53) File "main.py", line 53: def rref(matrix, graphlen): <source elided> matrix = np.array(matrix) % PH ^ |
Testing if the previous output contains the string All tests passed
: False
Testing if the previous output contains the string njit
: True
Testing if the previous output contains the string nopython
: False
Testing if the previous output contains the string import numba
: False
Testing if the previous output contains the string from numba
: True
Rewrite this function to use numba and nopython mode. You can assume that the input is a 2d matrix correctly formatted. Call it rref still. def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 pivots = [] used_for_row = [set([i]) for i in range(matrix.shape[0])] matrix = matrix%PH while col+extra < matrix.shape[1]-1 and col < matrix.shape[0]: if matrix[col,col+extra] == 0: if np.all(matrix[:,col] == 0): extra += 1 continue other = np.argwhere(matrix[:,col+extra] != 0).flatten()[-1] if other < col: extra += 1 continue matrix[col], matrix[other] = list(matrix[other]), list(matrix[col]) used_for_row[col], used_for_row[other] = used_for_row[other], used_for_row[col] pivots.append(col+extra) pivot = matrix[col,col+extra] if col+extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH-1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH-2 pivot //= 2 matrix[col] *= pivot matrix[col] %= PH others = np.argwhere(matrix[:,col+extra]).flatten() for i in others: if i == col: continue used_for_row[i] |= used_for_row[col] if col < graphlen: matrix[i] -= matrix[col]*matrix[i,col+extra] else: while matrix[i,col+extra] != 0: matrix[i] = (matrix[i]-matrix[col])%PH matrix[i] %= PH col += 1 matrix = np.array(matrix)%PH return [sorted(x) for x in used_for_row]
Rewrite this function to use numba and nopython mode. You can assume that the input is a 2d matrix correctly formatted. Call it rref still. def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 pivots = [] used_for_row = [set([i]) for i in range(matrix.shape[0])] matrix = matrix%PH while col+extra < matrix.shape[1]-1 and col < matrix.shape[0]: if matrix[col,col+extra] == 0: if np.all(matrix[:,col] == 0): extra += 1 continue other = np.argwhere(matrix[:,col+extra] != 0).flatten()[-1] if other < col: extra += 1 continue matrix[col], matrix[other] = list(matrix[other]), list(matrix[col]) used_for_row[col], used_for_row[other] = used_for_row[other], used_for_row[col] pivots.append(col+extra) pivot = matrix[col,col+extra] if col+extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH-1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH-2 pivot //= 2 matrix[col] *= pivot matrix[col] %= PH others = np.argwhere(matrix[:,col+extra]).flatten() for i in others: if i == col: continue used_for_row[i] |= used_for_row[col] if col < graphlen: matrix[i] -= matrix[col]*matrix[i,col+extra] else: while matrix[i,col+extra] != 0: matrix[i] = (matrix[i]-matrix[col])%PH matrix[i] %= PH col += 1 matrix = np.array(matrix)%PH return [sorted(x) for x in used_for_row]
To convert the provided function to use Numba in nopython mode, we need to make sure that the code is compatible with Numba's restrictions. This includes avoiding Python objects like lists of sets and using numpy arrays instead. Here's a rewritten version of your function using Numba:
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 | import numpy as np from numba import njit @njit def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 n_rows, n_cols = matrix.shape used_for_row = np.zeros((n_rows, n_rows), dtype=np.int32) for i in range(n_rows): used_for_row[i, i] = 1 matrix = matrix % PH while col + extra < n_cols - 1 and col < n_rows: if matrix[col, col + extra] == 0: if np.all(matrix[:, col + extra] == 0): extra += 1 continue others = np.where(matrix[:, col + extra] != 0)[0] if len(others) == 0 or others[-1] < col: extra += 1 continue other = others[-1] matrix[[col, other]] = matrix[[other, col]] used_for_row[[col, other]] = used_for_row[[other, col]] pivot = matrix[col, col + extra] if col + extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH - 1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH - 2 pivot //= 2 matrix[col] = (matrix[col] * pivot) % PH others = np.where(matrix[:, col + extra])[0] for i in others: if i == col: continue used_for_row[i] |= used_for_row[col] if col < graphlen: matrix[i] = (matrix[i] - matrix[col] * matrix[i, col + extra]) % PH else: while matrix[i, col + extra] != 0: matrix[i] = (matrix[i] - matrix[col]) % PH col += 1 used_for_row_lists = [] for i in range(n_rows): row_list = [] for j in range(n_rows): if used_for_row[i, j] == 1: row_list.append(j) used_for_row_lists.append(np.array(row_list)) return used_for_row_lists |
I extracted the following code from that output:
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 | import numpy as np from numba import njit @njit def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 n_rows, n_cols = matrix.shape used_for_row = np.zeros((n_rows, n_rows), dtype=np.int32) for i in range(n_rows): used_for_row[i, i] = 1 matrix = matrix % PH while col + extra < n_cols - 1 and col < n_rows: if matrix[col, col + extra] == 0: if np.all(matrix[:, col + extra] == 0): extra += 1 continue others = np.where(matrix[:, col + extra] != 0)[0] if len(others) == 0 or others[-1] < col: extra += 1 continue other = others[-1] matrix[[col, other]] = matrix[[other, col]] used_for_row[[col, other]] = used_for_row[[other, col]] pivot = matrix[col, col + extra] if col + extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH - 1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH - 2 pivot //= 2 matrix[col] = (matrix[col] * pivot) % PH others = np.where(matrix[:, col + extra])[0] for i in others: if i == col: continue used_for_row[i] |= used_for_row[col] if col < graphlen: matrix[i] = (matrix[i] - matrix[col] * matrix[i, col + extra]) % PH else: while matrix[i, col + extra] != 0: matrix[i] = (matrix[i] - matrix[col]) % PH col += 1 used_for_row_lists = [] for i in range(n_rows): row_list = [] for j in range(n_rows): if used_for_row[i, j] == 1: row_list.append(j) used_for_row_lists.append(np.array(row_list)) return used_for_row_lists |
Running the following program:
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 | import numpy as np from numba import njit @njit def rref(matrix, graphlen): PH = 16 extra = 0 col = 0 n_rows, n_cols = matrix.shape used_for_row = np.zeros((n_rows, n_rows), dtype=np.int32) for i in range(n_rows): used_for_row[i, i] = 1 matrix = matrix % PH while col + extra < n_cols - 1 and col < n_rows: if matrix[col, col + extra] == 0: if np.all(matrix[:, col + extra] == 0): extra += 1 continue others = np.where(matrix[:, col + extra] != 0)[0] if len(others) == 0 or others[-1] < col: extra += 1 continue other = others[-1] matrix[[col, other]] = matrix[[other, col]] used_for_row[[col, other]] = used_for_row[[other, col]] pivot = matrix[col, col + extra] if col + extra < graphlen: assert np.abs(pivot) == 1 or np.abs(pivot) == PH - 1 else: assert np.abs(pivot) == 2 or np.abs(pivot) == PH - 2 pivot //= 2 matrix[col] = (matrix[col] * pivot) % PH others = np.where(matrix[:, col + extra])[0] for i in others: if i == col: continue used_for_row[i] |= used_for_row[col] if col < graphlen: matrix[i] = (matrix[i] - matrix[col] * matrix[i, col + extra]) % PH else: while matrix[i, col + extra] != 0: matrix[i] = (matrix[i] - matrix[col]) % PH col += 1 used_for_row_lists = [] for i in range(n_rows): row_list = [] for j in range(n_rows): if used_for_row[i, j] == 1: row_list.append(j) used_for_row_lists.append(np.array(row_list)) return used_for_row_lists arr = np.array([[1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -20], [0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, 0, 0, 0, -20], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, 0, -30], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, 0, -20], [1, 0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -1, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -14], [0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, 0, -30], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, -1, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -13], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, -1, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, 0, -20], [0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -13], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -13], [0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, 0, -10], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -13], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -11], [0, 0, 1, 0, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -9], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, 0, -20], [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, -1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -2, -40], [1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]]) answer = rref(arr, 37) expected = [[0, 38], [0, 38], [0, 6, 28, 35, 38], [0, 6, 18, 21, 28, 35, 38], [0, 6, 28, 35, 38], [0, 6, 21, 28, 35, 38], [0, 5, 10, 23, 38], [0, 5, 10, 23, 38], [0, 5, 10, 23, 38], [0, 5, 9, 10, 23, 38], [0, 5, 9, 10, 13, 17, 23, 30, 38], [0, 5, 9, 10, 11, 23, 27, 38], [0, 5, 9, 10, 11, 23, 27, 38], [0, 5, 9, 10, 11, 23, 25, 27, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 24, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 5, 7, 8, 9, 10, 11, 12, 15, 16, 19, 23, 25, 26, 27, 34, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [0, 5, 9, 10, 13, 17, 23, 30, 38], [0, 5, 9, 10, 13, 17, 23, 30, 38], [0, 5, 9, 10, 13, 17, 23, 30, 32, 38], [0, 5, 9, 10, 13, 17, 23, 30, 32, 33, 38], [0, 22, 29, 38], [0, 22, 29, 38], [0, 6, 28, 35, 38], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 15, 16, 19, 20, 21, 23, 25, 26, 27, 28, 31, 34, 35, 36, 37, 38], [14, 18, 21, 28, 35]] assert answer == expected, f'Wrong answer; got {answer} instead of {expected}' print('All tests passed') |
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 | Traceback (most recent call last): File "/usr/src/app/main.py", line 69, in <module> answer = rref(arr, 37) File "/usr/local/lib/python3.10/dist-packages/numba/core/dispatcher.py", line 468, in _compile_for_args error_rewrite(e, 'typing') File "/usr/local/lib/python3.10/dist-packages/numba/core/dispatcher.py", line 409, in error_rewrite raise e.with_traceback(None) numba.core.errors.TypingError: Failed in nopython mode pipeline (step: nopython frontend) No implementation of function Function(<built-in function getitem>) found for signature:</p> <blockquote> <blockquote> <blockquote> <p>getitem(array(int64, 2d, C), list(int64)<iv=None>)</p> </blockquote> </blockquote> </blockquote> <p>There are 22 candidate implementations: - Of which 20 did not match due to: Overload of function 'getitem': File: <numerous>: Line N/A. With argument(s): '(array(int64, 2d, C), list(int64)<iv=None>)': No match. - Of which 2 did not match due to: Overload in function 'GetItemBuffer.generic': File: numba/core/typing/arraydecl.py: Line 209. With argument(s): '(array(int64, 2d, C), list(int64)<iv=None>)': Rejected as the implementation raised a specific error: NumbaTypeError: Unsupported array index type list(int64)<iv=None> in [List(int64, False)] raised from /usr/local/lib/python3.10/dist-packages/numba/core/typing/arraydecl.py:102 During: typing of intrinsic-call at /usr/src/app/main.py (29) File "main.py", line 29: def rref(matrix, graphlen): <source elided> other = others[-1] matrix[[col, other]] = matrix[[other, col]] ^ |
Testing if the previous output contains the string All tests passed
: False
Testing if the previous output contains the string njit
: True
Testing if the previous output contains the string nopython
: False
Testing if the previous output contains the string import numba
: False
Testing if the previous output contains the string from numba
: True